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TMEM216 Transmembrane protein 216 [ Zeugodacus cucurbitae (melon fly) ]

Gene ID: 105214140, updated on 23-May-2024

Summary

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Gene symbol
TMEM216
Gene description
Transmembrane protein 216
See related
EnsemblRapid:LOC105214140
Gene type
protein coding
RefSeq status
MODEL
Organism
Zeugodacus cucurbitae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Zeugodacus; Zeugodacus
Also known as
TMEM216_0; TMEM216_1
Orthologs
fruit fly all
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Genomic context

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See TMEM216 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current idZeuCucr1.2 (GCF_028554725.1) 2 NC_071667.1 (5307855..5316378, complement)
101 previous assembly ASM80634v1 (GCF_000806345.1) Unplaced Scaffold NW_011863725.1 (1336565..1344742)

Chromosome 2 - NC_071667.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase alpha catalytic subunit Neighboring gene uncharacterized LOC105214142 Neighboring gene transmembrane protein 216 Neighboring gene cyclin G Neighboring gene Cyclin-dependent kinase subunit 85A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reconstructing a comprehensive transcriptome assembly of a white-pupal translocated strain of the pest fruit fly Bactrocera cucurbitae. Sim SB, et al. Gigascience, 2015. PMID 25830018, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC105214140

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028554725.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idZeuCucr1.2 Primary Assembly

Genomic

  1. NC_071667.1 Reference idZeuCucr1.2 Primary Assembly

    Range
    5307855..5316378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011187382.3 → XP_011185684.1  uncharacterized protein LOC105214140

    See identical proteins and their annotated locations for XP_011185684.1

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_011185684.1, XM_011187382.3
    Conserved Domains (1) summary
    pfam09799
    Location:12 → 115
    Transmemb_17; Predicted membrane protein

  2. XM_011187373.3 → XP_011185675.1  uncharacterized protein LOC105214140

    See identical proteins and their annotated locations for XP_011185675.1

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_011185675.1, XM_011187373.3
    Conserved Domains (1) summary
    pfam09799
    Location:12 → 115
    Transmemb_17; Predicted membrane protein

  3. XM_011187372.3 → XP_011185674.1  uncharacterized protein LOC105214140

    See identical proteins and their annotated locations for XP_011185674.1

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_011185674.1, XM_011187372.3
    Conserved Domains (1) summary
    pfam09799
    Location:12 → 115
    Transmemb_17; Predicted membrane protein

  4. XM_011187376.3 → XP_011185678.1  uncharacterized protein LOC105214140

    See identical proteins and their annotated locations for XP_011185678.1

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_011185678.1, XM_011187376.3
    Conserved Domains (1) summary
    pfam09799
    Location:12 → 115
    Transmemb_17; Predicted membrane protein

  5. XM_054225343.1 → XP_054081318.1  uncharacterized protein LOC105214140

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_054081318.1, XM_054225343.1

  6. XM_011187377.3 → XP_011185679.1  uncharacterized protein LOC105214140

    See identical proteins and their annotated locations for XP_011185679.1

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_011185679.1, XM_011187377.3
    Conserved Domains (1) summary
    pfam09799
    Location:12 → 115
    Transmemb_17; Predicted membrane protein

  7. XM_054225344.1 → XP_054081319.1  uncharacterized protein LOC105214140

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_054081319.1, XM_054225344.1

  8. XM_054225345.1 → XP_054081320.1  uncharacterized protein LOC105214140

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_054081320.1, XM_054225345.1

  9. XM_054225346.1 → XP_054081321.1  uncharacterized protein LOC105214140

    UniProtKB/TrEMBL
    A0A0A1WQF7
    Related
    XP_054081321.1, XM_054225346.1
Nucleotide Protein
Heading Accession and Version

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