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eIF4A eukaryotic translation initiation factor 4A [ Solenopsis invicta (red fire ant) ]

Gene ID: 105208077, updated on 1-Oct-2024

Summary

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Gene symbol
eIF4A
Gene description
eukaryotic translation initiation factor 4A
Locus tag
SINV_07394
Gene type
protein coding
RefSeq status
MODEL
Organism
Solenopsis invicta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
Orthologs
honey bee all
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Genomic context

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See eIF4A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UNIL_Sinv_3.0 (GCF_016802725.1) 1 NC_052664.1 (29869057..29876794, complement)
103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521560.1 (1878894..1886260, complement)

Chromosome 1 - NC_052664.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L46 Neighboring gene probable 18S rRNA (guanine-N(7))-methyltransferase Neighboring gene activating signal cointegrator 1 complex subunit 1 Neighboring gene SET domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the fire ant Solenopsis invicta. Wurm Y, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282665, Free PMC Article
  2. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic initiation factor 4A-I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UNIL_Sinv_3.0

Genomic

  1. NC_052664.1 Reference UNIL_Sinv_3.0

    Range
    29869057..29876794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011177831.3 → XP_011176133.1  eukaryotic initiation factor 4A-I

    See identical proteins and their annotated locations for XP_011176133.1

    UniProtKB/TrEMBL
    E9IEB5
    Conserved Domains (3) summary
    PTZ00424
    Location:38 → 423
    PTZ00424; helicase 45; Provisional
    cd00268
    Location:52 → 252
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    pfam00271
    Location:274 → 378
    Helicase_C; Helicase conserved C-terminal domain
Nucleotide Protein
Heading Accession and Version

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