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LOC105202231 carbohydrate sulfotransferase 11 [ Solenopsis invicta (red fire ant) ]

Gene ID: 105202231, updated on 2-Oct-2024

Summary

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Gene symbol
LOC105202231
Gene description
carbohydrate sulfotransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Solenopsis invicta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
Orthologs
honey bee all
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Genomic context

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See LOC105202231 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UNIL_Sinv_3.0 (GCF_016802725.1) 13 NC_052676.1 (2249080..2252618)
103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521644.1 (319416..323722)

Chromosome 13 - NC_052676.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class Z Neighboring gene YTH domain containing 1 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene Ubiquitin-like activating enzyme 2 Neighboring gene Spinophilin Neighboring gene dynein assembly factor 4, axonemal Neighboring gene vascular endothelial growth factor A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UNIL_Sinv_3.0

Genomic

  1. NC_052676.1 Reference UNIL_Sinv_3.0

    Range
    2249080..2252618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026137628.2 → XP_025993413.2  carbohydrate sulfotransferase 11

    Conserved Domains (1) summary
    cl22970
    Location:116 → 353
    Sulfotransfer_2; Sulfotransferase family

  2. XM_039456906.1 → XP_039312840.1  carbohydrate sulfotransferase 11

    Conserved Domains (1) summary
    cl22970
    Location:116 → 353
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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