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LOC105199316 galactoside alpha-(1,2)-fucosyltransferase 2 [ Solenopsis invicta (red fire ant) ]

Gene ID: 105199316, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105199316
Gene description
galactoside alpha-(1,2)-fucosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Solenopsis invicta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
Orthologs
honey bee all
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Genomic context

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See LOC105199316 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UNIL_Sinv_3.0 (GCF_016802725.1) 16 NC_052679.1 (15476624..15481907, complement)
103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521595.1 (735562..740803)

Chromosome 16 - NC_052679.1Genomic Context describing neighboring genes Neighboring gene protein RFT1 homolog Neighboring gene Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 Neighboring gene pantothenate kinase 3 fbl Neighboring gene uncharacterized LOC105199317 Neighboring gene Growth arrest specific protein 8 Neighboring gene erythroid differentiation-related factor 1 Neighboring gene arrestin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactoside alpha-(1,2)-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UNIL_Sinv_3.0

Genomic

  1. NC_052679.1 Reference UNIL_Sinv_3.0

    Range
    15476624..15481907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011166346.3 → XP_011164648.1  galactoside alpha-(1,2)-fucosyltransferase 2

    See identical proteins and their annotated locations for XP_011164648.1

    Conserved Domains (2) summary
    cd11301
    Location:73 → 333
    Fut1_Fut2_like; Alpha-1,2-fucosyltransferase
    pfam12633
    Location:1 → 75
    Adenyl_cycl_N; Adenylate cyclase NT domain

  2. XM_011166347.3 → XP_011164649.1  galactoside alpha-(1,2)-fucosyltransferase 2

    See identical proteins and their annotated locations for XP_011164649.1

    Conserved Domains (2) summary
    cd11301
    Location:73 → 333
    Fut1_Fut2_like; Alpha-1,2-fucosyltransferase
    pfam12633
    Location:1 → 75
    Adenyl_cycl_N; Adenylate cyclase NT domain
Nucleotide Protein
Heading Accession and Version

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