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LOC105196467 LARGE xylosyl- and glucuronyltransferase 2 [ Solenopsis invicta (red fire ant) ]

Gene ID: 105196467, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105196467
Gene description
LARGE xylosyl- and glucuronyltransferase 2
Locus tag
SINV_09453
Gene type
protein coding
RefSeq status
MODEL
Organism
Solenopsis invicta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
Orthologs
honey bee all
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Genomic context

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See LOC105196467 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
104 current UNIL_Sinv_3.0 (GCF_016802725.1) 2 NC_052665.1 (2653660..2669207, complement)
103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521577.1 (843051..858523, complement)

Chromosome 2 - NC_052665.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120356979 Neighboring gene kekkon 5 Neighboring gene PI-actitoxin-Afv2a Neighboring gene sushi domain containing 2 mesh Neighboring gene CCR4-NOT transcription complex subunit Pop2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the fire ant Solenopsis invicta. Wurm Y, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282665, Free PMC Article
  2. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 2
Names
glycosyltransferase-like protein LARGE2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UNIL_Sinv_3.0

Genomic

  1. NC_052665.1 Reference UNIL_Sinv_3.0

    Range
    2653660..2669207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011162419.3 → XP_011160721.2  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:77 → 354
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:400 → 675
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_039446083.1 → XP_039302017.1  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:77 → 354
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:400 → 675
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  3. XM_011162420.3 → XP_011160722.2  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:77 → 354
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:400 → 675
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  4. XM_039446082.1 → XP_039302016.1  LARGE xylosyl- and glucuronyltransferase 2

    Conserved Domains (2) summary
    cd06431
    Location:77 → 354
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:400 → 675
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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