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Pgant35A polypeptide N-acetylgalactosaminyltransferase 35A [ Solenopsis invicta (red fire ant) ]

Gene ID: 105193017, updated on 10-Oct-2024

Summary

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Gene symbol
Pgant35A
Gene description
polypeptide N-acetylgalactosaminyltransferase 35A
Locus tag
SINV_03796
Gene type
protein coding
RefSeq status
MODEL
Organism
Solenopsis invicta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
Orthologs
fruit fly honey bee all
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Genomic context

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See Pgant35A in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UNIL_Sinv_3.0 (GCF_016802725.1) 3 NC_052666.1 (212442..215658, complement)
103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521629.1 (173851..177109, complement)

Chromosome 3 - NC_052666.1Genomic Context describing neighboring genes Neighboring gene AP-3 complex subunit carmine Neighboring gene transcriptional adapter 1 Neighboring gene syntenin-1 Neighboring gene chromosome segregation 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 35A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UNIL_Sinv_3.0

Genomic

  1. NC_052666.1 Reference UNIL_Sinv_3.0

    Range
    212442..215658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026137245.2 → XP_025993030.2  polypeptide N-acetylgalactosaminyltransferase 35A

    Conserved Domains (2) summary
    cd02510
    Location:171 → 466
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    smart00458
    Location:507 → 618
    RICIN; Ricin-type beta-trefoil
Nucleotide Protein
Heading Accession and Version

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