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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Harpegnathos saltator (Jerdon's jumping ant) ]

Gene ID: 105192315, updated on 10-Oct-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
Locus tag
EAI_17212
See related
EnsemblRapid:LOC105192315
Gene type
protein coding
RefSeq status
MODEL
Organism
Harpegnathos saltator
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Harpegnathos
Orthologs
fruit fly honey bee all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Hsal_v8.5 (GCF_003227715.1) Unplaced Scaffold NW_020230299.1 (40615..48824)
101 previous assembly HarSal_1.0 (GCF_000147195.1) Unplaced Scaffold NW_011647518.1 (466275..474402, complement)

NW_020230299.1Genomic Context describing neighboring genes Neighboring gene chaperonin containing TCP1 subunit 4 Neighboring gene carboxypeptidase N subunit 2 Neighboring gene N-acetylgalactosaminyltransferase 7 Neighboring gene WASH complex subunit 1 Neighboring gene uncharacterized LOC105192310 Neighboring gene TNF receptor-associated factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein
Names
Congested-like trachea protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Harpegnathos saltator Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hsal_v8.5

Genomic

  1. NW_020230299.1 Reference Hsal_v8.5

    Range
    40615..48824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011156364.3 → XP_011154666.1  mitochondrial carnitine/acylcarnitine carrier protein

    See identical proteins and their annotated locations for XP_011154666.1

    Related
    XP_011154666.1, XM_011156364.3
    Conserved Domains (2) summary
    PTZ00169
    Location:11 → 271
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:103 → 195
    Mito_carr; Mitochondrial carrier protein

  2. XM_011156363.3 → XP_011154665.1  mitochondrial carnitine/acylcarnitine carrier protein

    See identical proteins and their annotated locations for XP_011154665.1

    Related
    XP_011154665.1, XM_011156363.3
    Conserved Domains (2) summary
    PTZ00169
    Location:11 → 271
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:103 → 195
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein Strain
Heading Accession and Version

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