U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105187020 glutamic acid-rich protein [ Harpegnathos saltator (Jerdon's jumping ant) ]

Gene ID: 105187020, updated on 10-May-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105187020
Gene description
glutamic acid-rich protein
Locus tag
EAI_10809
See related
EnsemblRapid:LOC105187020
Gene type
protein coding
RefSeq status
MODEL
Organism
Harpegnathos saltator
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Harpegnathos
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105187020 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Hsal_v8.5 (GCF_003227715.1) Unplaced Scaffold NW_020229935.1 (386068..395307, complement)
101 previous assembly HarSal_1.0 (GCF_000147195.1) Unplaced Scaffold NW_011652032.1 (868340..877557, complement)

NW_020229935.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105187026 Neighboring gene U2 snRNP-associated SURP motif-containing protein Neighboring gene Ras GTPase activating protein 1 Neighboring gene O-glucosyltransferase rumi homolog Neighboring gene Matrix metalloproteinase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glutamic acid-rich protein; protein Ycf2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Harpegnathos saltator Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hsal_v8.5

Genomic

  1. NW_020229935.1 Reference Hsal_v8.5

    Range
    386068..395307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025296689.1 → XP_025152474.1  glutamic acid-rich protein isoform X3

    UniProtKB/TrEMBL
    E2BVM4
    Related
    XP_025152474.1, XM_025296689.1

  2. XM_011147586.3 → XP_011145888.1  protein Ycf2 isoform X2

    UniProtKB/TrEMBL
    E2BVM4
    Related
    XP_011145888.1, XM_011147586.3

  3. XM_025296688.1 → XP_025152473.1  protein Ycf2 isoform X1

    UniProtKB/TrEMBL
    E2BVM4
    Related
    XP_025152473.1, XM_025296688.1

  4. XM_019843133.2 → XP_019698692.1  protein Ycf2 isoform X4

    UniProtKB/TrEMBL
    E2BVM4
    Related
    XP_019698692.1, XM_019843133.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases