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LOC105178252 GPI mannosyltransferase 1-like [ Sesamum indicum (sesame) ]

Gene ID: 105178252, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105178252
Gene description
GPI mannosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105178252 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
10
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG15 NC_026159.1 (8494273..8517876, complement)

Linkage Group LG15 - NC_026159.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105178248 Neighboring gene MADS-box protein SVP Neighboring gene uncharacterized LOC105178251 Neighboring gene transcription factor bHLH30-like Neighboring gene glycine-rich cell wall structural protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026159.1 Chromosome LG15 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers. Wei W, et al. BMC Genomics, 2011 Sep 19. PMID 21929789, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026159.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    8494273..8517876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011101693.2 → XP_011099995.1  GPI mannosyltransferase 1-like isoform X3

    UniProtKB/TrEMBL
    A0A6I9UF86
    Conserved Domains (1) summary
    cl21590
    Location:4 → 337
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_011101691.2 → XP_011099993.1  GPI mannosyltransferase 1-like isoform X1

    See identical proteins and their annotated locations for XP_011099993.1

    UniProtKB/TrEMBL
    A0A6I9ULH8
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 427
    PLN02841; GPI mannosyltransferase

  3. XM_011101690.2 → XP_011099992.1  GPI mannosyltransferase 1-like isoform X1

    See identical proteins and their annotated locations for XP_011099992.1

    UniProtKB/TrEMBL
    A0A6I9ULH8
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 427
    PLN02841; GPI mannosyltransferase

  4. XM_011101688.2 → XP_011099990.1  GPI mannosyltransferase 1-like isoform X1

    See identical proteins and their annotated locations for XP_011099990.1

    UniProtKB/TrEMBL
    A0A6I9ULH8
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 427
    PLN02841; GPI mannosyltransferase

  5. XM_020699034.1 → XP_020554693.1  GPI mannosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A6I9ULH8
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 427
    PLN02841; GPI mannosyltransferase

  6. XM_011101689.2 → XP_011099991.1  GPI mannosyltransferase 1-like isoform X1

    See identical proteins and their annotated locations for XP_011099991.1

    UniProtKB/TrEMBL
    A0A6I9ULH8
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 427
    PLN02841; GPI mannosyltransferase

  7. XM_011101692.2 → XP_011099994.1  GPI mannosyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A6I9UXU4
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 427
    PLN02841; GPI mannosyltransferase

RNA

  1. XR_849127.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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