U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105177554 uncharacterized protein At1g04910 [ Sesamum indicum (sesame) ]

Gene ID: 105177554, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105177554
Gene description
uncharacterized protein At1g04910
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105177554 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
9
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG15 NC_026159.1 (2422074..2425626)

Linkage Group LG15 - NC_026159.1Genomic Context describing neighboring genes Neighboring gene auxin transport protein BIG Neighboring gene U3 small nucleolar ribonucleoprotein protein IMP3-like Neighboring gene calcium/calmodulin-regulated receptor-like kinase 2 Neighboring gene uncharacterized LOC105177557

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_026159.1 Chromosome LG15 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein At1g04910

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026159.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    2422074..2425626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011100748.2 → XP_011099050.1  uncharacterized protein At1g04910

    UniProtKB/TrEMBL
    A0A6I9UD36
    Conserved Domains (2) summary
    cd11299
    Location:116 → 441
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
    pfam10250
    Location:119 → 442
    O-FucT; GDP-fucose protein O-fucosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases