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LOC105177307 probable galacturonosyltransferase 14 [ Sesamum indicum (sesame) ]

Gene ID: 105177307, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105177307
Gene description
probable galacturonosyltransferase 14
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105177307 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
6
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG15 NC_026159.1 (1246324..1251639, complement)

Linkage Group LG15 - NC_026159.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105177304 Neighboring gene pentatricopeptide repeat-containing protein At3g29290 Neighboring gene membrane-anchored ubiquitin-fold protein 1 Neighboring gene pentatricopeptide repeat-containing protein At5g39350 Neighboring gene BAG family molecular chaperone regulator 8, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026159.1 Chromosome LG15 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026159.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    1246324..1251639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011100413.2 → XP_011098715.1  probable galacturonosyltransferase 14

    UniProtKB/TrEMBL
    A0A6I9UIR8
    Conserved Domains (2) summary
    cd06429
    Location:213 → 525
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02870
    Location:1 → 537
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
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