U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105176930 alpha-1,3/1,6-mannosyltransferase ALG2 [ Sesamum indicum (sesame) ]

Gene ID: 105176930, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105176930
Gene description
alpha-1,3/1,6-mannosyltransferase ALG2
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105176930 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
8
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG14 NC_026158.1 (4004632..4008944, complement)

Linkage Group LG14 - NC_026158.1Genomic Context describing neighboring genes Neighboring gene IRK-interacting protein-like Neighboring gene anaphase-promoting complex subunit 6 Neighboring gene BUD13 homolog Neighboring gene protein DELAY OF GERMINATION 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_026158.1 Chromosome LG14 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026158.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    4004632..4008944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011099912.2 → XP_011098214.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A6I9UJK8
    Conserved Domains (2) summary
    cd03805
    Location:9 → 395
    GT1_ALG2_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2) ...
    COG0438
    Location:8 → 406
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases