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LOC105175757 alpha-(1,4)-fucosyltransferase [ Sesamum indicum (sesame) ]

Gene ID: 105175757, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105175757
Gene description
alpha-(1,4)-fucosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105175757 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
3
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG2 NC_026146.1 (703379..705952)

Linkage Group LG2 - NC_026146.1Genomic Context describing neighboring genes Neighboring gene probable alkaline/neutral invertase D Neighboring gene CDK-activating kinase assembly factor MAT1 Neighboring gene uncharacterized LOC105175750 Neighboring gene protein TIC 40, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026146.1 Chromosome LG2 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,4)-fucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026146.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    703379..705952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011098332.2 → XP_011096634.1  alpha-(1,4)-fucosyltransferase

    UniProtKB/TrEMBL
    A0A6I9U782
    Conserved Domains (1) summary
    pfam00852
    Location:224 → 399
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
Nucleotide Protein
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