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LOC105174445 dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase [ Sesamum indicum (sesame) ]

Gene ID: 105174445, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105174445
Gene description
dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105174445 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
9
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG11 NC_026155.1 (14023468..14028155)

Linkage Group LG11 - NC_026155.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent protein kinase inhibitor SMR3 Neighboring gene actin-4 Neighboring gene probable protein phosphatase 2C 23 Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026155.1 Chromosome LG11 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026155.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    14023468..14028155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011096551.2 → XP_011094853.1  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A6I9UKB9
    Conserved Domains (1) summary
    pfam04922
    Location:28 → 461
    DIE2_ALG10; DIE2/ALG10 family

  2. XM_011096553.2 → XP_011094855.1  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A6I9U391
    Conserved Domains (1) summary
    pfam04922
    Location:6 → 384
    DIE2_ALG10; DIE2/ALG10 family

  3. XM_020698141.1 → XP_020553800.1  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8M8VBB9
    Conserved Domains (1) summary
    pfam04922
    Location:39 → 419
    DIE2_ALG10; DIE2/ALG10 family
Nucleotide Protein
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