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LOC105173115 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [ Sesamum indicum (sesame) ]

Gene ID: 105173115, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105173115
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105173115 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
4
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG11 NC_026155.1 (746478..750374)

Linkage Group LG11 - NC_026155.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105173112 Neighboring gene BAG family molecular chaperone regulator 6 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC105173116

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026155.1 Chromosome LG11 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers. Wei W, et al. BMC Genomics, 2011 Sep 19. PMID 21929789, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026155.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    746478..750374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011094770.2 → XP_011093072.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    UniProtKB/TrEMBL
    A0A6I9U735
    Conserved Domains (1) summary
    pfam03407
    Location:123 → 339
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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