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LOC105169615 arabinosyltransferase RRA2-like [ Sesamum indicum (sesame) ]

Gene ID: 105169615, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105169615
Gene description
arabinosyltransferase RRA2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105169615 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
2
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG8 NC_026152.1 (20102496..20105856, complement)

Linkage Group LG8 - NC_026152.1Genomic Context describing neighboring genes Neighboring gene deSI-like protein At4g17486 Neighboring gene uncharacterized LOC110012390 Neighboring gene HVA22-like protein k Neighboring gene putative pentatricopeptide repeat-containing protein At3g18840

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026152.1 Chromosome LG8 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase RRA2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026152.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    20102496..20105856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011090055.2 → XP_011088357.1  arabinosyltransferase RRA2-like

    UniProtKB/TrEMBL
    A0A6I9TQ69
    Conserved Domains (1) summary
    pfam03407
    Location:191 → 416
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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