U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105169521 scopoletin glucosyltransferase-like [ Sesamum indicum (sesame) ]

Gene ID: 105169521, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105169521
Gene description
scopoletin glucosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105169521 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
1
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG8 NC_026152.1 (19509920..19511789, complement)

Linkage Group LG8 - NC_026152.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g06744-like Neighboring gene protein IRREGULAR XYLEM 15-like Neighboring gene scopoletin glucosyltransferase-like Neighboring gene probable E3 ubiquitin ligase SUD1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_026152.1 Chromosome LG8 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers. Wei W, et al. BMC Genomics, 2011 Sep 19. PMID 21929789, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
scopoletin glucosyltransferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026152.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    19509920..19511789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011089925.2 → XP_011088227.1  scopoletin glucosyltransferase-like

    UniProtKB/TrEMBL
    A0A6I9TTI7
    Conserved Domains (2) summary
    TIGR01426
    Location:13 → 456
    MGT; glycosyltransferase, MGT family
    cl10013
    Location:3 → 473
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases