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LOC105168508 probable galacturonosyltransferase 11 [ Sesamum indicum (sesame) ]

Gene ID: 105168508, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105168508
Gene description
probable galacturonosyltransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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Location:
chromosome: LG8
Exon count:
2
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG8 NC_026152.1 (13706966..13712929, complement)

Linkage Group LG8 - NC_026152.1Genomic Context describing neighboring genes Neighboring gene D-aminoacyl-tRNA deacylase Neighboring gene isoaspartyl peptidase/L-asparaginase 1 Neighboring gene uncharacterized LOC105168509 Neighboring gene truncated transcription factor CAULIFLOWER A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026152.1 Chromosome LG8 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026152.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    13706966..13712929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011088614.2 → XP_011086916.1  probable galacturonosyltransferase 11

    UniProtKB/TrEMBL
    A0A6I9TMU9
    Conserved Domains (2) summary
    cd06429
    Location:229 → 522
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02742
    Location:1 → 534
    PLN02742; Probable galacturonosyltransferase
Nucleotide Protein
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