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LOC105167919 lactosylceramide 4-alpha-galactosyltransferase [ Sesamum indicum (sesame) ]

Gene ID: 105167919, updated on 28-Aug-2022

Summary

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Gene symbol
LOC105167919
Gene description
lactosylceramide 4-alpha-galactosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105167919 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
1
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG8 NC_026152.1 (8197881..8199918, complement)

Linkage Group LG8 - NC_026152.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105167918 Neighboring gene dof zinc finger protein DOF5.8-like Neighboring gene protein RTF1 homolog Neighboring gene uncharacterized LOC105167921

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026152.1 Chromosome LG8 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026152.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    8197881..8199918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011087797.2 → XP_011086099.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    A0A6I9TNG9
    Conserved Domains (2) summary
    pfam04572
    Location:308 → 412
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:164 → 286
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
Heading Accession and Version

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