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LOC105165840 putative callose synthase 8 [ Sesamum indicum (sesame) ]

Gene ID: 105165840, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105165840
Gene description
putative callose synthase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105165840 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
42
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG6 NC_026150.1 (22700559..22717334)

Linkage Group LG6 - NC_026150.1Genomic Context describing neighboring genes Neighboring gene probable H/ACA ribonucleoprotein complex subunit 1 Neighboring gene uncharacterized LOC105165527 Neighboring gene pentatricopeptide repeat-containing protein At3g14580, mitochondrial Neighboring gene C2 domain-containing protein At1g53590

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026150.1 Chromosome LG6 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative callose synthase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026150.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    22700559..22717334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020694240.1 → XP_020549899.1  putative callose synthase 8

    UniProtKB/TrEMBL
    A0A8M8V0U7
    Conserved Domains (3) summary
    pfam02364
    Location:1080 → 1777
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:66 → 175
    Vta1; Vta1 like
    pfam14288
    Location:341 → 442
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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