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LOC105162532 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [ Sesamum indicum (sesame) ]

Gene ID: 105162532, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105162532
Gene description
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105162532 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
1
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG5 NC_026149.1 (12963052..12965009)

Linkage Group LG5 - NC_026149.1Genomic Context describing neighboring genes Neighboring gene 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like Neighboring gene adenylosuccinate synthetase 2, chloroplastic Neighboring gene polyol transporter 5 Neighboring gene uncharacterized LOC105162534

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026149.1 Chromosome LG5 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development and validation of genic-SSR markers in sesame by RNA-seq. Zhang H, et al. BMC Genomics, 2012 Jul 16. PMID 22800194, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026149.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    12963052..12965009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011080580.2 → XP_011078882.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A6I9TDX7
    Conserved Domains (1) summary
    pfam05060
    Location:74 → 414
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)
Nucleotide Protein
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