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LOC105156797 UDP-N-acetylglucosamine transferase subunit ALG13 homolog [ Sesamum indicum (sesame) ]

Gene ID: 105156797, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105156797
Gene description
UDP-N-acetylglucosamine transferase subunit ALG13 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Sesamum indicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Genomic context

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See LOC105156797 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
3
Annotation release Status Assembly LG Location
101 current S_indicum_v1.0 (GCF_000512975.1) LG1 NC_026145.1 (5279448..5281206, complement)

Linkage Group LG1 - NC_026145.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110012136 Neighboring gene ARF guanine-nucleotide exchange factor GNOM-like Neighboring gene 60S ribosomal export protein NMD3-like Neighboring gene 26S protease regulatory subunit 6B homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026145.1 Chromosome LG1 Reference S_indicum_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of UDP-N-acetylglucosamine transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine transferase subunit ALG13 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sesamum indicum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S_indicum_v1.0 Primary Assembly

Genomic

  1. NC_026145.1 Reference S_indicum_v1.0 Primary Assembly

    Range
    5279448..5281206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011073016.2 → XP_011071318.1  UDP-N-acetylglucosamine transferase subunit ALG13 homolog

    UniProtKB/TrEMBL
    A0A6I9SV94
    Conserved Domains (1) summary
    cl10013
    Location:13 → 168
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
Heading Accession and Version

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