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LOC105121576 mitochondrial carnitine/acylcarnitine carrier-like protein [ Populus euphratica (Euphrates poplar) ]

Gene ID: 105121576, updated on 1-Aug-2024

Summary

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Gene symbol
LOC105121576
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus euphratica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC105121576 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current PopEup_1.0 (GCF_000495115.1) Unplaced Scaffold NW_011499851.1 (2340441..2343867, complement)

NW_011499851.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein HaeIII subfamily 1-like Neighboring gene abscisic acid receptor PYR1-like Neighboring gene putative DNA-binding protein ESCAROLA Neighboring gene transcriptional regulator SUPERMAN-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011499851.1 Unplaced Scaffold Reference PopEup_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus euphratica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PopEup_1.0 Primary Assembly

Genomic

  1. NW_011499851.1 Reference PopEup_1.0 Primary Assembly

    Range
    2340441..2343867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011020273.1 → XP_011018575.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X1

    UniProtKB/TrEMBL
    A0AAJ6TXJ5
    Conserved Domains (1) summary
    pfam00153
    Location:206 → 297
    Mito_carr; Mitochondrial carrier protein

  2. XM_011020279.1 → XP_011018581.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    See identical proteins and their annotated locations for XP_011018581.1

    UniProtKB/TrEMBL
    A0AAJ6TX19
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

  3. XM_011020277.1 → XP_011018579.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    See identical proteins and their annotated locations for XP_011018579.1

    UniProtKB/TrEMBL
    A0AAJ6TX19
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

  4. XM_011020276.1 → XP_011018578.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    See identical proteins and their annotated locations for XP_011018578.1

    UniProtKB/TrEMBL
    A0AAJ6TX19
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

  5. XM_011020275.1 → XP_011018577.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    See identical proteins and their annotated locations for XP_011018577.1

    UniProtKB/TrEMBL
    A0AAJ6TX19
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

  6. XM_011020274.1 → XP_011018576.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    See identical proteins and their annotated locations for XP_011018576.1

    UniProtKB/TrEMBL
    A0AAJ6TX19
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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