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GALC galactosylceramidase [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105105382, updated on 10-Oct-2024

Summary

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Gene symbol
GALC
Gene description
galactosylceramidase
Locus tag
Cadr_000006323
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See GALC in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 5 NC_087440.1 (80145860..80201219, complement)
101 previous assembly CamDro3 (GCF_000803125.2) 6 NC_044516.1 (83044279..83101484, complement)

Chromosome 5 - NC_087440.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene G protein-coupled receptor 65 Neighboring gene potassium two pore domain channel subfamily K member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactocerebrosidase
Names
Galactocerebrosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087440.1 Reference mCamDro1.pat

    Range
    80145860..80201219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031454144.2 → XP_031310004.1  galactocerebrosidase isoform X1

    UniProtKB/TrEMBL
    A0A5N4E434
    Conserved Domains (2) summary
    pfam02057
    Location:55 → 349
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:357 → 463
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  2. XM_031454148.2 → XP_031310008.1  galactocerebrosidase isoform X3

    UniProtKB/TrEMBL
    A0A5N4E434

  3. XM_031454146.2 → XP_031310006.1  galactocerebrosidase isoform X2

    UniProtKB/TrEMBL
    A0A5N4E434
    Conserved Domains (2) summary
    pfam02057
    Location:21 → 262
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:270 → 376
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  4. XM_031454149.2 → XP_031310009.1  galactocerebrosidase isoform X3

    UniProtKB/TrEMBL
    A0A5N4E434
    Conserved Domains (2) summary
    pfam02057
    Location:1 → 233
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:241 → 347
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  5. XM_031454147.2 → XP_031310007.1  galactocerebrosidase isoform X3

    UniProtKB/TrEMBL
    A0A5N4E434
    Conserved Domains (2) summary
    pfam02057
    Location:1 → 233
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:241 → 347
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  6. XM_064486171.1 → XP_064342241.1  galactocerebrosidase isoform X3

  7. XM_064486172.1 → XP_064342242.1  galactocerebrosidase isoform X4

Nucleotide Protein
Heading Accession and Version

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