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PIGM phosphatidylinositol glycan anchor biosynthesis class M [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105100144, updated on 19-Apr-2024

Summary

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Gene symbol
PIGM
Gene description
phosphatidylinositol glycan anchor biosynthesis class M
Locus tag
Cadr_000024569
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See PIGM in Genome Data Viewer
Location:
chromosome: 23
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 23 NC_087458.1 (10108350..10111053, complement)
101 previous assembly CamDro3 (GCF_000803125.2) 21 NC_044531.1 (19692529..19696071)

Chromosome 23 - NC_087458.1Genomic Context describing neighboring genes Neighboring gene SLAM family member 9 Neighboring gene Fc receptor-like protein 6 Neighboring gene potassium inwardly rectifying channel subfamily J member 10 Neighboring gene potassium inwardly rectifying channel subfamily J member 9 Neighboring gene mth938 domain-containing protein-like Neighboring gene immunoglobulin superfamily member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087458.1 Reference mCamDro1.pat

    Range
    10108350..10111053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010993110.3 → XP_010991412.1  GPI mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A5N4CPY3
    Conserved Domains (1) summary
    pfam05007
    Location:140 → 402
    Mannosyl_trans; Mannosyltransferase (PIG-M)
Nucleotide Protein
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