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GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105093720, updated on 19-Apr-2024

Summary

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Gene symbol
GALNT13
Gene description
polypeptide N-acetylgalactosaminyltransferase 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See GALNT13 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 4 NC_087439.1 (32795082..33253108)
101 previous assembly CamDro3 (GCF_000803125.2) 5 NC_044515.1 (30619435..31078275)

Chromosome 4 - NC_087439.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135321209 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene reprimo, TP53 dependent G2 arrest mediator homolog Neighboring gene potassium inwardly rectifying channel subfamily J member 3 Neighboring gene ATP synthase F(0) complex subunit C2, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087439.1 Reference mCamDro1.pat

    Range
    32795082..33253108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031451413.2 → XP_031307273.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:118 → 418
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:431 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_010985618.3 → XP_010983920.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

    See identical proteins and their annotated locations for XP_010983920.1

    Conserved Domains (2) summary
    cd02510
    Location:118 → 418
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:431 → 547
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_064484785.1 → XP_064340855.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X3

  4. XM_031451415.2 → XP_031307275.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:118 → 418
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:431 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_064484786.1 → XP_064340856.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X4

Nucleotide Protein
Heading Accession and Version

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