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DAG1 dystroglycan 1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105087695, updated on 19-Apr-2024

Summary

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Gene symbol
DAG1
Gene description
dystroglycan 1
Locus tag
Cadr_000020343
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See DAG1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 17 NC_087452.1 (33741383..33791624, complement)
101 previous assembly CamDro3 (GCF_000803125.2) 17 NC_044527.1 (17613397..17665801)

Chromosome 17 - NC_087452.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 123 Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene bassoon presynaptic cytomatrix protein Neighboring gene ubiquitin-conjugating enzyme E2 E1-like Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene aminomethyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in morphogenesis of an epithelium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle attachment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nerve development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of dystroglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of dystrophin-associated glycoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystroglycan 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087452.1 Reference mCamDro1.pat

    Range
    33741383..33791624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031470322.2 → XP_031326182.1  dystroglycan 1 isoform X1

    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    pfam05109
    Location:319 → 494
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam05454
    Location:605 → 894
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    pfam18424
    Location:182 → 304
    a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

  2. XM_031470319.2 → XP_031326179.1  dystroglycan 1 isoform X1

    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    pfam05109
    Location:319 → 494
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam05454
    Location:605 → 894
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    pfam18424
    Location:182 → 304
    a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

  3. XM_031470320.2 → XP_031326180.1  dystroglycan 1 isoform X1

    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    pfam05109
    Location:319 → 494
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam05454
    Location:605 → 894
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    pfam18424
    Location:182 → 304
    a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

  4. XM_031470321.2 → XP_031326181.1  dystroglycan 1 isoform X1

    Conserved Domains (4) summary
    cd11303
    Location:62 → 163
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    pfam05109
    Location:319 → 494
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam05454
    Location:605 → 894
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    pfam18424
    Location:182 → 304
    a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

  5. XM_031470325.2 → XP_031326185.1  dystroglycan 1 isoform X2

    UniProtKB/TrEMBL
    A0A5N4CYC1
    Conserved Domains (4) summary
    cd11303
    Location:331 → 435
    Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
    pfam05109
    Location:153 → 328
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam05454
    Location:439 → 728
    DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    pfam18424
    Location:16 → 138
    a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2
Nucleotide Protein
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