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CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Camelus dromedarius (Arabian camel) ]

Gene ID: 105086444, updated on 19-Apr-2024

Summary

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Gene symbol
CSGALNACT1
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 1
Locus tag
Cadr_000026378
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus dromedarius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See CSGALNACT1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 22 NC_087457.1 (8994789..9251289)
101 previous assembly CamDro3 (GCF_000803125.2) 26 NC_044536.1 (677672..815909)

Chromosome 22 - NC_087457.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 10 Neighboring gene transfer RNA threonine (anticodon GGU) Neighboring gene SH2 domain containing 4A Neighboring gene uncharacterized LOC116149089

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCamDro1.pat

Genomic

  1. NC_087457.1 Reference mCamDro1.pat

    Range
    8994789..9251289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064477394.1 → XP_064333464.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  2. XM_064477395.1 → XP_064333465.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  3. XM_031439993.2 → XP_031295853.2  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  4. XM_031439992.2 → XP_031295852.2  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  5. XM_064477396.1 → XP_064333466.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  6. XM_031439994.2 → XP_031295854.2  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  7. XM_064477397.1 → XP_064333467.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  8. XM_031439995.2 → XP_031295855.2  chondroitin sulfate N-acetylgalactosaminyltransferase 1

  9. XM_064477398.1 → XP_064333468.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

Nucleotide Protein
Heading Accession and Version

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