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LOC105052351 probable galacturonosyltransferase 7 [ Elaeis guineensis (African oil palm) ]

Gene ID: 105052351, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105052351
Gene description
probable galacturonosyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Elaeis guineensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Genomic context

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See LOC105052351 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
102 current EG5 (GCF_000442705.1) 10 NC_026002.1 (9085806..9095966)

Chromosome 10 - NC_026002.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 56-B Neighboring gene calcium uniporter protein 6, mitochondrial Neighboring gene L-ascorbate oxidase homolog Neighboring gene keratinocyte-associated protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026002.1 Chromosome 10 Reference EG5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Elaeis guineensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EG5 Primary Assembly

Genomic

  1. NC_026002.1 Reference EG5 Primary Assembly

    Range
    9085806..9095966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010933127.3 → XP_010931429.1  probable galacturonosyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A6I9RS13
    Conserved Domains (2) summary
    cd06429
    Location:349 → 634
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02769
    Location:1 → 646
    PLN02769; Probable galacturonosyltransferase

  2. XM_010933129.3 → XP_010931431.1  probable galacturonosyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A6I9RSZ8
    Conserved Domains (2) summary
    cd06429
    Location:330 → 615
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02769
    Location:1 → 627
    PLN02769; Probable galacturonosyltransferase
Nucleotide Protein
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