U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

eprs1 glutamyl-prolyl-tRNA synthetase 1 [ Esox lucius (northern pike) ]

Gene ID: 105030940, updated on 18-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
eprs1
Gene description
glutamyl-prolyl-tRNA synthetase 1
See related
Ensembl:ENSELUG00000019744
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
eprs
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See eprs1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
35
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 15 NC_047583.1 (31957871..32000265)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG15 NC_025982.4 (32175276..32216969)

Chromosome 15 - NC_047583.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 61B Neighboring gene speedy/RINGO cell cycle regulator family member A Neighboring gene small nucleolar RNA SNORA5 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene uncharacterized LOC109615530 Neighboring gene glyoxalase 1 Neighboring gene BTB (POZ) domain containing 9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proline-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in prolyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
bifunctional glutamate/proline--tRNA ligase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047583.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    31957871..32000265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010905078.5 → XP_010903380.3  bifunctional glutamate/proline--tRNA ligase isoform X1

    UniProtKB/TrEMBL
    A0A3P8YUQ4, A0A3P9AEC4
    Related
    ENSELUP00000046670.2, ENSELUT00000066485.2
    Conserved Domains (4) summary
    PLN02907
    Location:1 → 721
    PLN02907; glutamate-tRNA ligase
    PRK08661
    Location:1177 → 1670
    PRK08661; prolyl-tRNA synthetase; Provisional
    cd00936
    Location:983 → 1032
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...
    pfam00458
    Location:765 → 817
    WHEP-TRS; WHEP-TRS domain

  2. XM_010905080.5 → XP_010903382.3  bifunctional glutamate/proline--tRNA ligase isoform X2

    UniProtKB/TrEMBL
    A0A3P9AEC4
    Related
    ENSELUP00000020319.3, ENSELUT00000030759.3
    Conserved Domains (4) summary
    PLN02907
    Location:1 → 714
    PLN02907; glutamate-tRNA ligase
    PRK08661
    Location:1170 → 1663
    PRK08661; prolyl-tRNA synthetase; Provisional
    cd00936
    Location:976 → 1025
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...
    pfam00458
    Location:758 → 810
    WHEP-TRS; WHEP-TRS domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.