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LOC105030687 torsin-1A-interacting protein 2-like [ Esox lucius (northern pike) ]

Gene ID: 105030687, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105030687
Gene description
torsin-1A-interacting protein 2-like
See related
Ensembl:ENSELUG00000032885
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105030687 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 8 NC_047576.1 (33962756..33969102)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG08 NC_025975.4 (34085648..34091994)

Chromosome 8 - NC_047576.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105030684 Neighboring gene uncharacterized LOC117594821 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047576.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    33962756..33969102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020044291.2 → XP_019899850.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:214 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_020044293.2 → XP_019899852.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:214 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_020044290.2 → XP_019899849.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:214 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_020044296.2 → XP_019899855.1  torsin-1A-interacting protein 2-like isoform X4

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:213 → 468
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  5. XM_020044294.2 → XP_019899853.1  torsin-1A-interacting protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:213 → 468
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  6. XM_020044300.2 → XP_019899859.1  torsin-1A-interacting protein 2-like isoform X8

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:206 → 464
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  7. XM_020044301.2 → XP_019899860.1  torsin-1A-interacting protein 2-like isoform X9

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Related
    ENSELUP00000067052.2, ENSELUT00000085887.2
    Conserved Domains (1) summary
    pfam05609
    Location:205 → 463
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  8. XM_020044295.2 → XP_019899854.1  torsin-1A-interacting protein 2-like isoform X3

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:213 → 468
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  9. XM_020044298.2 → XP_019899857.1  torsin-1A-interacting protein 2-like isoform X6

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:212 → 467
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  10. XM_020044299.2 → XP_019899858.1  torsin-1A-interacting protein 2-like isoform X7

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:211 → 466
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  11. XM_020044292.2 → XP_019899851.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:214 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  12. XM_020044297.2 → XP_019899856.1  torsin-1A-interacting protein 2-like isoform X5

    UniProtKB/TrEMBL
    A0A6Q2YNN5
    Conserved Domains (1) summary
    pfam05609
    Location:209 → 467
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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