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LOC105029443 poly [ADP-ribose] polymerase tankyrase-1 [ Esox lucius (northern pike) ]

Gene ID: 105029443, updated on 18-Sep-2024

Summary

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Gene symbol
LOC105029443
Gene description
poly [ADP-ribose] polymerase tankyrase-1
See related
Ensembl:ENSELUG00000008089
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105029443 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
28
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 13 NC_047581.1 (22663994..22693862, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG13 NC_025980.4 (17203130..17232992)

Chromosome 13 - NC_047581.1Genomic Context describing neighboring genes Neighboring gene purpurin Neighboring gene ATP synthase membrane subunit eb Neighboring gene alpha-L-iduronidase Neighboring gene piwi-like RNA-mediated gene silencing 2 Neighboring gene uncharacterized LOC114840719

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly [ADP-ribose] polymerase tankyrase-1
Names
tankyrase-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047581.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    22663994..22693862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010902803.5 → XP_010901105.2  poly [ADP-ribose] polymerase tankyrase-1 isoform X1

    UniProtKB/TrEMBL
    A0A3P8ZPG1
    Related
    ENSELUP00000045323.1, ENSELUT00000059064.2
    Conserved Domains (6) summary
    PTZ00322
    Location:111 → 195
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02876
    Location:157 → 595
    PHA02876; ankyrin repeat protein; Provisional
    cd09524
    Location:958 → 1023
    SAM_tankyrase1,2; SAM domain of tankyrase1,2 subfamily
    PHA03095
    Location:574 → 907
    PHA03095; ankyrin-like protein; Provisional
    cd01438
    Location:1025 → 1250
    tankyrase_like; Tankyrases interact with the telomere reverse transcriptase complex (TERT). Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin ...
    sd00045
    Location:304 → 332
    ANK; ANK repeat [structural motif]

  2. XM_010902806.5 → XP_010901108.2  poly [ADP-ribose] polymerase tankyrase-1 isoform X4

    UniProtKB/TrEMBL
    A0A3P8ZPF0
    Related
    ENSELUP00000030729.2, ENSELUT00000007568.3
    Conserved Domains (6) summary
    PTZ00322
    Location:111 → 195
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02876
    Location:157 → 588
    PHA02876; ankyrin repeat protein; Provisional
    cd09524
    Location:951 → 1016
    SAM_tankyrase1,2; SAM domain of tankyrase1,2 subfamily
    PHA03095
    Location:567 → 900
    PHA03095; ankyrin-like protein; Provisional
    cd01438
    Location:1018 → 1240
    tankyrase_like; Tankyrases interact with the telomere reverse transcriptase complex (TERT). Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin ...
    sd00045
    Location:297 → 325
    ANK; ANK repeat [structural motif]

  3. XM_010902805.5 → XP_010901107.2  poly [ADP-ribose] polymerase tankyrase-1 isoform X3

    UniProtKB/TrEMBL
    A0A3P8ZPF0
    Conserved Domains (6) summary
    PTZ00322
    Location:111 → 195
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02876
    Location:157 → 588
    PHA02876; ankyrin repeat protein; Provisional
    cd09524
    Location:951 → 1016
    SAM_tankyrase1,2; SAM domain of tankyrase1,2 subfamily
    PHA03095
    Location:567 → 900
    PHA03095; ankyrin-like protein; Provisional
    cd01438
    Location:1018 → 1243
    tankyrase_like; Tankyrases interact with the telomere reverse transcriptase complex (TERT). Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin ...
    sd00045
    Location:297 → 325
    ANK; ANK repeat [structural motif]

  4. XM_010902804.5 → XP_010901106.2  poly [ADP-ribose] polymerase tankyrase-1 isoform X2

    UniProtKB/TrEMBL
    A0A3P8ZPG1
    Related
    ENSELUP00000030739.2, ENSELUT00000007546.3
    Conserved Domains (6) summary
    PTZ00322
    Location:111 → 195
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    PHA02876
    Location:157 → 595
    PHA02876; ankyrin repeat protein; Provisional
    cd09524
    Location:958 → 1023
    SAM_tankyrase1,2; SAM domain of tankyrase1,2 subfamily
    PHA03095
    Location:574 → 907
    PHA03095; ankyrin-like protein; Provisional
    cd01438
    Location:1025 → 1247
    tankyrase_like; Tankyrases interact with the telomere reverse transcriptase complex (TERT). Tankyrase 1 poly-ADP-ribosylates Telomere Repeat Binding Factor 1 (TRF1) while Tankyrase 2 can poly-ADP-ribosylate itself or TRF1. The tankyrases also contain multiple ankyrin ...
    sd00045
    Location:304 → 332
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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