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dnajb6b DnaJ heat shock protein family (Hsp40) member B6b [ Esox lucius (northern pike) ]

Gene ID: 105029434, updated on 18-Jun-2024

Summary

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Gene symbol
dnajb6b
Gene description
DnaJ heat shock protein family (Hsp40) member B6b
See related
Ensembl:ENSELUG00000005338
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
dnajb6
Orthologs
human zebrafish all
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Genomic context

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See dnajb6b in Genome Data Viewer
Location:
chromosome: 21
Exon count:
10
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 21 NC_047589.1 (10200714..10241252)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG21 NC_025988.4 (22271238..22314153, complement)

Chromosome 21 - NC_047589.1Genomic Context describing neighboring genes Neighboring gene zinc finger, AN1-type domain 1 Neighboring gene charged multivesicular body protein 4C Neighboring gene NXPE family member 3-like Neighboring gene tropomyosin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6b
Names
DnaJ heat shock protein family (Hsp40) member B6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047589.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    10200714..10241252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029116095.2 → XP_028971928.1  dnaJ homolog subfamily B member 6b isoform X1

    UniProtKB/TrEMBL
    A0A3P8XLV9, A0A3P8ZIK3
    Related
    ENSELUP00000028664.2, ENSELUT00000012815.3
    Conserved Domains (1) summary
    COG0484
    Location:2 → 140
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_029116098.2 → XP_028971931.1  dnaJ homolog subfamily B member 6b isoform X3

    UniProtKB/TrEMBL
    A0A3P8XLV9
    Conserved Domains (1) summary
    COG0484
    Location:2 → 140
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  3. XM_029116097.2 → XP_028971930.1  dnaJ homolog subfamily B member 6b isoform X2

    UniProtKB/TrEMBL
    A0A3P8XLV9
    Conserved Domains (1) summary
    COG0484
    Location:2 → 139
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  4. XM_029116099.2 → XP_028971932.1  dnaJ homolog subfamily B member 6b isoform X4

    UniProtKB/TrEMBL
    A0A3P8XLV9
    Conserved Domains (1) summary
    COG0484
    Location:2 → 139
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  5. XM_029116096.2 → XP_028971929.1  dnaJ homolog subfamily B member 6b isoform X1

    UniProtKB/TrEMBL
    A0A3P8XLV9, A0A3P8ZIK3
    Conserved Domains (1) summary
    COG0484
    Location:2 → 140
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  6. XM_010902788.5 → XP_010901090.3  dnaJ homolog subfamily B member 6b isoform X6

    Conserved Domains (1) summary
    PRK10767
    Location:4 → 137
    PRK10767; chaperone protein DnaJ; Provisional

  7. XM_010902786.5 → XP_010901088.3  dnaJ homolog subfamily B member 6b isoform X5

    Conserved Domains (1) summary
    PRK10767
    Location:4 → 138
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
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