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septin9b septin 9b [ Esox lucius (northern pike) ]

Gene ID: 105029029, updated on 18-Jun-2024

Summary

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Gene symbol
septin9b
Gene description
septin 9b
See related
Ensembl:ENSELUG00000007255
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
sept9b
Orthologs
zebrafish all
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Genomic context

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See septin9b in Genome Data Viewer
Location:
chromosome: 9
Exon count:
17
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 9 NC_047577.1 (16247251..16320192, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG09 NC_025976.4 (16449892..16522164, complement)

Chromosome 9 - NC_047577.1Genomic Context describing neighboring genes Neighboring gene trinucleotide repeat containing adaptor 6C2 Neighboring gene uncharacterized LOC105029039 Neighboring gene uncharacterized LOC109616125 Neighboring gene zinc finger protein OZF-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin 9b
Names
septin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047577.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    16247251..16320192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013135383.4 → XP_012990837.1  septin 9b isoform X2

    UniProtKB/TrEMBL
    A0A3P8XP86, A0A3P8XP91
    Conserved Domains (2) summary
    cd01850
    Location:270 → 542
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:252 → 551
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  2. XM_013135384.4 → XP_012990838.1  septin 9b isoform X3

    UniProtKB/TrEMBL
    A0A3P8XP91, A0A3P8ZP12
    Conserved Domains (2) summary
    cd01850
    Location:269 → 541
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:251 → 550
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  3. XM_013135385.4 → XP_012990839.1  septin 9b isoform X4

    UniProtKB/TrEMBL
    A0A3P8XP91
    Conserved Domains (2) summary
    cd01850
    Location:237 → 509
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:219 → 518
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  4. XM_013135382.4 → XP_012990836.1  septin 9b isoform X1

    UniProtKB/TrEMBL
    A0A3P8XP91, A0A3P8XSU0
    Conserved Domains (2) summary
    cd01850
    Location:280 → 552
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:262 → 561
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  5. XM_010902148.5 → XP_010900450.1  septin 9b isoform X5

    UniProtKB/TrEMBL
    A0A6Q2WYF3
    Conserved Domains (2) summary
    cd01850
    Location:67 → 339
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:49 → 348
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  6. XM_010902151.5 → XP_010900453.1  septin 9b isoform X6

    See identical proteins and their annotated locations for XP_010900453.1

    UniProtKB/TrEMBL
    A0A6Q2WYF3
    Related
    ENSELUP00000071185.2, ENSELUT00000078869.2
    Conserved Domains (2) summary
    cd01850
    Location:40 → 312
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:22 → 321
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  7. XM_010902149.5 → XP_010900451.1  septin 9b isoform X6

    See identical proteins and their annotated locations for XP_010900451.1

    UniProtKB/TrEMBL
    A0A6Q2WYF3
    Related
    ENSELUP00000057978.1, ENSELUT00000085441.2
    Conserved Domains (2) summary
    cd01850
    Location:40 → 312
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:22 → 321
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  8. XM_010902150.5 → XP_010900452.1  septin 9b isoform X6

    See identical proteins and their annotated locations for XP_010900452.1

    UniProtKB/TrEMBL
    A0A6Q2WYF3
    Related
    ENSELUP00000046195.2, ENSELUT00000066685.2
    Conserved Domains (2) summary
    cd01850
    Location:40 → 312
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:22 → 321
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
Nucleotide Protein
Heading Accession and Version

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