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rab33a RAB33A, member RAS oncogene family [ Esox lucius (northern pike) ]

Gene ID: 105026978, updated on 18-Jun-2024

Summary

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Gene symbol
rab33a
Gene description
RAB33A, member RAS oncogene family
See related
Ensembl:ENSELUG00000013219
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See rab33a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 4 NC_047572.1 (18937949..18944801, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG04 NC_025971.4 (15920832..15927544)

Chromosome 4 - NC_047572.1Genomic Context describing neighboring genes Neighboring gene matrix-remodeling-associated protein 5 Neighboring gene lateral signaling target protein 2 homolog Neighboring gene matrix-remodeling-associated protein 5-like Neighboring gene selenoprotein T, 2 Neighboring gene SLIT and NTRK-like family, member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-33A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047572.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    18937949..18944801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010898836.3 → XP_010897138.1  ras-related protein Rab-33A

    UniProtKB/TrEMBL
    A0A3P9A0B3, A0A6Q2Y5M6
    Related
    ENSELUP00000034595.1, ENSELUT00000021479.3
    Conserved Domains (2) summary
    cd04115
    Location:39 → 208
    Rab33B_Rab33A; Rab GTPase family 33 includes Rab33A and Rab33B
    smart00175
    Location:41 → 209
    RAB; Rab subfamily of small GTPases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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