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LOC105025829 ADP-ribosylation factor-like protein 3 [ Esox lucius (northern pike) ]

Gene ID: 105025829, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105025829
Gene description
ADP-ribosylation factor-like protein 3
See related
Ensembl:ENSELUG00000042855
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105025829 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 4 NC_047572.1 (22499115..22503177)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG04 NC_025971.4 (12296294..12300004, complement)

Chromosome 4 - NC_047572.1Genomic Context describing neighboring genes Neighboring gene regulator of G-protein signaling 14 Neighboring gene uncharacterized LOC105025827 Neighboring gene profilin-3 Neighboring gene uncharacterized LOC109615733

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047572.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    22499115..22503177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010896814.3 → XP_010895116.1  ADP-ribosylation factor-like protein 3

    UniProtKB/TrEMBL
    A0A3P9A6J1
    Related
    ENSELUP00000081216.1, ENSELUT00000089025.1
    Conserved Domains (2) summary
    smart00178
    Location:23 → 183
    SAR; Sar1p-like members of the Ras-family of small GTPases
    cd04155
    Location:8 → 182
    Arl3; Arf-like 3 (Arl3) GTPase
Nucleotide Protein
Heading Accession and Version

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