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cul4b cullin 4B [ Esox lucius (northern pike) ]

Gene ID: 105025584, updated on 18-Jun-2024

Summary

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Gene symbol
cul4b
Gene description
cullin 4B
See related
Ensembl:ENSELUG00000020172
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See cul4b in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 4 NC_047572.1 (8157800..8172140, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG04 NC_025971.4 (26687136..26701440)

Chromosome 4 - NC_047572.1Genomic Context describing neighboring genes Neighboring gene ATPase Na+/K+ transporting subunit beta 4 Neighboring gene lysosomal-associated membrane protein 2 Neighboring gene histone-lysine N-methyltransferase, H3 lysine-79 specific-like Neighboring gene MCTS1 re-initiation and release factor Neighboring gene beta-mannosyltransferase 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4B-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cullin-4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047572.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    8157800..8172140 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020046062.2 → XP_019901621.1  cullin-4B isoform X2

    UniProtKB/TrEMBL
    A0A3P8YWR0, A0A6Q2XV16
    Related
    ENSELUP00000072389.1, ENSELUT00000087198.2
    Conserved Domains (2) summary
    smart00884
    Location:786 → 849
    Cullin_Nedd8; Cullin protein neddylation domain
    pfam00888
    Location:163 → 755
    Cullin; Cullin family

  2. XM_010896380.4 → XP_010894682.2  cullin-4B isoform X1

    UniProtKB/TrEMBL
    A0A6Q2XV16
    Related
    ENSELUP00000021011.3, ENSELUT00000031547.3
    Conserved Domains (2) summary
    smart00884
    Location:789 → 852
    Cullin_Nedd8; Cullin protein neddylation domain
    pfam00888
    Location:163 → 758
    Cullin; Cullin family

  3. XM_029119365.2 → XP_028975198.1  cullin-4B isoform X3

    Conserved Domains (1) summary
    pfam00888
    Location:162 → 579
    Cullin; Cullin family
Nucleotide Protein
Heading Accession and Version

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