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aco2 aconitase 2, mitochondrial [ Esox lucius (northern pike) ]

Gene ID: 105025085, updated on 18-Jun-2024

Summary

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Gene symbol
aco2
Gene description
aconitase 2, mitochondrial
See related
Ensembl:ENSELUG00000019769
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See aco2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 5 NC_047573.1 (17136530..17144196)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG05 NC_025972.4 (17317628..17325309)

Chromosome 5 - NC_047573.1Genomic Context describing neighboring genes Neighboring gene TEF transcription factor, PAR bZIP family member a Neighboring gene PHD finger protein 5A Neighboring gene cold shock domain containing C2, RNA binding a Neighboring gene guanylate cyclase 2Cb

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aconitate hydratase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047573.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    17136530..17144196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010895524.4 → XP_010893826.2  aconitate hydratase, mitochondrial

    UniProtKB/TrEMBL
    A0A6Q2XUN8
    Related
    ENSELUP00000049931.2, ENSELUT00000055720.2
    Conserved Domains (1) summary
    TIGR01340
    Location:47 → 778
    aconitase_mito; aconitate hydratase, mitochondrial
Nucleotide Protein
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