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rnaseh1 ribonuclease H1 [ Esox lucius (northern pike) ]

Gene ID: 105024819, updated on 18-Jun-2024

Summary

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Gene symbol
rnaseh1
Gene description
ribonuclease H1
See related
Ensembl:ENSELUG00000010112
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See rnaseh1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 18 NC_047586.1 (18142496..18145593, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG18 NC_025985.4 (18303377..18306438, complement)

Chromosome 18 - NC_047586.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 43 Neighboring gene myelin transcription factor 1-like, a Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene ribosomal protein S7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication, removal of RNA primer IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease H1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047586.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    18142496..18145593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010895045.5 → XP_010893347.1  ribonuclease H1

    UniProtKB/TrEMBL
    A0A3P8Y0B6, A0A6Q2WR17
    Related
    ENSELUP00000043575.2, ENSELUT00000086410.2
    Conserved Domains (2) summary
    cd09280
    Location:153 → 294
    RNase_HI_eukaryote_like; Eukaryotic RNase H is essential and is longer and more complex than their prokaryotic counterparts
    pfam01693
    Location:29 → 70
    Cauli_VI; Caulimovirus viroplasmin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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