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LOC105024664 ras-related protein Rab-39B [ Esox lucius (northern pike) ]

Gene ID: 105024664, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105024664
Gene description
ras-related protein Rab-39B
See related
Ensembl:ENSELUG00000041238
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105024664 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (7285522..7296720, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG07 NC_025974.4 (43770736..43782096)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109615940 Neighboring gene cationic amino acid transporter 3 Neighboring gene phosphatidylinositol-binding clathrin assembly protein Neighboring gene RAB38c, member of RAS oncogene family Neighboring gene phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-39B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    7285522..7296720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020048365.3 → XP_019903924.2  ras-related protein Rab-39B

    UniProtKB/TrEMBL
    A0A3P8XHS3
    Related
    ENSELUP00000088166.1, ENSELUT00000095578.1
    Conserved Domains (1) summary
    cd04111
    Location:7 → 213
    Rab39; Rab GTPase family 39 (Rab39)

  2. XM_010894742.5 → XP_010893044.2  ras-related protein Rab-39B

    UniProtKB/TrEMBL
    A0A3P8XHS3
    Conserved Domains (1) summary
    cd04111
    Location:7 → 213
    Rab39; Rab GTPase family 39 (Rab39)
Nucleotide Protein
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