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asap1a ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [ Esox lucius (northern pike) ]

Gene ID: 105024511, updated on 18-Jun-2024

Summary

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Gene symbol
asap1a
Gene description
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a
See related
Ensembl:ENSELUG00000018358
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
asap1
Orthologs
zebrafish all
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Genomic context

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See asap1a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
29
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 3 NC_047571.1 (26484933..26535241, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG03 NC_025970.4 (10256382..10307357)

Chromosome 3 - NC_047571.1Genomic Context describing neighboring genes Neighboring gene MYC proto-oncogene, bHLH transcription factor b Neighboring gene family with sequence similarity 49 member Ba Neighboring gene transmembrane and ubiquitin-like domain containing 1 Neighboring gene kelch-like family member 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei. Rondeau EB, et al. PLoS One, 2014. PMID 25069045, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a
Names
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047571.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    26484933..26535241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029118524.2 → XP_028974357.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X5

    UniProtKB/TrEMBL
    A0A6Q2WSS1
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1090 → 1146
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:708 → 1060
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:299 → 405
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:550 → 576
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:589 → 678
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:421 → 542
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  2. XM_029118523.2 → XP_028974356.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X4

    UniProtKB/TrEMBL
    A0A6Q2WSS1, A0A6Q2XH50
    Related
    ENSELUP00000053299.1, ENSELUT00000052018.2
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1091 → 1147
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:761 → 1080
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:296 → 402
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:547 → 578
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:585 → 674
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:418 → 539
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  3. XM_029118522.2 → XP_028974355.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X3

    UniProtKB/TrEMBL
    A0A6Q2WSS1
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1092 → 1148
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:762 → 1081
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:296 → 402
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:547 → 573
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:586 → 675
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:418 → 539
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  4. XM_029118527.2 → XP_028974360.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X8

    UniProtKB/TrEMBL
    A0A6Q2WY64
    Related
    ENSELUP00000051759.2, ENSELUT00000046695.2
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1035 → 1091
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:758 → 1024
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:299 → 405
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:550 → 581
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:588 → 677
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:421 → 542
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  5. XM_029118520.2 → XP_028974353.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X2

    UniProtKB/TrEMBL
    A0A6Q2WSS1
    Related
    ENSELUP00000062688.2, ENSELUT00000069615.2
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1094 → 1150
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:764 → 1083
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:299 → 405
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:550 → 581
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:588 → 677
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:421 → 542
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  6. XM_029118526.2 → XP_028974359.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X7

    UniProtKB/TrEMBL
    A0A6Q2WY64
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1036 → 1092
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:759 → 1025
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:299 → 405
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:550 → 576
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:589 → 678
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:421 → 542
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  7. XM_029118519.2 → XP_028974352.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X1

    UniProtKB/TrEMBL
    A0A6Q2WSS1
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1095 → 1151
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:765 → 1084
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:299 → 405
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:550 → 576
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:589 → 678
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:421 → 542
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  8. XM_029118528.2 → XP_028974361.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X9

    UniProtKB/TrEMBL
    A0A6Q2WY64, A0A6Q2XCQ4
    Related
    ENSELUP00000045862.1, ENSELUT00000070184.2
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1032 → 1088
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:755 → 1021
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:296 → 402
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:547 → 578
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:585 → 674
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:418 → 539
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  9. XM_029118525.2 → XP_028974358.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1a isoform X6

    UniProtKB/TrEMBL
    A0A6Q2WSS1
    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    PHA03247
    Location:765 → 1084
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:299 → 405
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:550 → 576
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:589 → 678
    Ank_2; Ankyrin repeats (3 copies)
    cd08848
    Location:421 → 542
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    cl17036
    Location:1095 → 1127
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
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