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LOC105024484 ras-related protein Rab-11B [ Esox lucius (northern pike) ]

Gene ID: 105024484, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105024484
Gene description
ras-related protein Rab-11B
See related
Ensembl:ENSELUG00000021148
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
YPTC6
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Genomic context

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See LOC105024484 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 3 NC_047571.1 (27706370..27712417)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG03 NC_025970.4 (9092876..9099031, complement)

Chromosome 3 - NC_047571.1Genomic Context describing neighboring genes Neighboring gene cortexin-1-like Neighboring gene mitochondrial import inner membrane translocase subunit TIM44 Neighboring gene E3 ubiquitin-protein ligase MARCHF2 Neighboring gene solute carrier family 25 member 36a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in constitutive secretory pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-11B
Names
Ras-related protein YPTC6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047571.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    27706370..27712417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010894453.4 → XP_010892755.1  ras-related protein Rab-11B

    UniProtKB/TrEMBL
    A0A3P8Z096
    Related
    ENSELUP00000086269.1, ENSELUT00000107497.1
    Conserved Domains (2) summary
    PLN03110
    Location:1 → 216
    PLN03110; Rab GTPase; Provisional
    cd01868
    Location:9 → 173
    Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25

RNA

  1. XR_004575629.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases