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srrt serrate RNA effector molecule homolog (Arabidopsis) [ Esox lucius (northern pike) ]

Gene ID: 105023912, updated on 18-Jun-2024

Summary

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Gene symbol
srrt
Gene description
serrate RNA effector molecule homolog (Arabidopsis)
See related
Ensembl:ENSELUG00000006651
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See srrt in Genome Data Viewer
Location:
chromosome: 7
Exon count:
20
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 7 NC_047575.1 (20860866..20873419)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG07 NC_025974.4 (30086057..30098670, complement)

Chromosome 7 - NC_047575.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 14I1-like Neighboring gene ring finger protein 167 Neighboring gene monoacylglycerol O-acyltransferase 3b Neighboring gene neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in primary miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serrate RNA effector molecule homolog
Names
serrate, RNA effector molecule

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047575.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    20860866..20873419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010893452.5 → XP_010891754.1  serrate RNA effector molecule homolog isoform X2

    UniProtKB/TrEMBL
    A0A3P8XQW3
    Conserved Domains (2) summary
    pfam04959
    Location:692 → 886
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:158 → 267
    DUF3546; Domain of unknown function (DUF3546)

  2. XM_010893451.5 → XP_010891753.1  serrate RNA effector molecule homolog isoform X1

    UniProtKB/TrEMBL
    A0A3P8XQW3
    Related
    ENSELUP00000090234.1, ENSELUT00000099649.1
    Conserved Domains (2) summary
    pfam04959
    Location:692 → 886
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:158 → 267
    DUF3546; Domain of unknown function (DUF3546)
Nucleotide Protein
Heading Accession and Version

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