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aco1 aconitase 1, soluble [ Esox lucius (northern pike) ]

Gene ID: 105022122, updated on 12-Sep-2024

Summary

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Gene symbol
aco1
Gene description
aconitase 1, soluble
See related
Ensembl:ENSELUG00000016812
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
zebrafish all
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Genomic context

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See aco1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
21
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 24 NC_047592.1 (10699550..10711399, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG24 NC_025991.4 (10777991..10789625, complement)

Chromosome 24 - NC_047592.1Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 4 Neighboring gene Fras1 related extracellular matrix 1a Neighboring gene U2 small nuclear ribonucleoprotein A' Neighboring gene alkaline ceramidase 2 Neighboring gene coiled-coil domain containing 149a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron-responsive element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic aconitate hydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047592.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    10699550..10711399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013140410.3 → XP_012995864.2  cytoplasmic aconitate hydratase

    UniProtKB/TrEMBL
    A0A6Q2Y0J8
    Related
    ENSELUP00000058845.2, ENSELUT00000049463.2
    Conserved Domains (1) summary
    PTZ00092
    Location:2 → 886
    PTZ00092; aconitate hydratase-like protein; Provisional
Nucleotide Protein
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