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rab4a RAB4a, member RAS oncogene family [ Esox lucius (northern pike) ]

Gene ID: 105021202, updated on 18-Jun-2024

Summary

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Gene symbol
rab4a
Gene description
RAB4a, member RAS oncogene family
See related
Ensembl:ENSELUG00000014785
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See rab4a in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 5 NC_047573.1 (20996232..21002880)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG05 NC_025972.4 (21218447..21223564)

Chromosome 5 - NC_047573.1Genomic Context describing neighboring genes Neighboring gene programmed cell death 2 Neighboring gene ras homolog family member Ua Neighboring gene centriole, cilia and spindle-associated protein b Neighboring gene actin alpha 1, skeletal muscle b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-4A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047573.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    20996232..21002880
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020046944.2 → XP_019902503.1  ras-related protein Rab-4A isoform X2

    UniProtKB/TrEMBL
    A0A3P9A4Q1
    Conserved Domains (1) summary
    cd04113
    Location:9 → 169
    Rab4; Rab GTPase family 4 (Rab4)

  2. XM_020046943.2 → XP_019902502.1  ras-related protein Rab-4A isoform X1

    UniProtKB/TrEMBL
    A0A3P9A4Q1
    Conserved Domains (1) summary
    cd04113
    Location:9 → 169
    Rab4; Rab GTPase family 4 (Rab4)

  3. XM_010888700.4 → XP_010887002.1  ras-related protein Rab-4A isoform X1

    See identical proteins and their annotated locations for XP_010887002.1

    UniProtKB/TrEMBL
    A0A3P9A4Q1
    Related
    ENSELUP00000035719.2, ENSELUT00000039057.3
    Conserved Domains (1) summary
    cd04113
    Location:9 → 169
    Rab4; Rab GTPase family 4 (Rab4)
Nucleotide Protein
Heading Accession and Version

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