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LOC105020282 mucin-17-like [ Esox lucius (northern pike) ]

Gene ID: 105020282, updated on 18-Sep-2024

Summary

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Gene symbol
LOC105020282
Gene description
mucin-17-like
See related
Ensembl:ENSELUG00000002966
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105020282 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
13
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 23 NC_047591.1 (12469563..12480638, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG23 NC_025990.4 (12918548..12929629)

Chromosome 23 - NC_047591.1Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain protein 3 Neighboring gene protein mono-ADP-ribosyltransferase PARP12 Neighboring gene TIN2_N and Myb_DNA-bind_4 domain-containing protein Neighboring gene uncharacterized LOC114833967

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mucin-17-like; uncharacterized protein LOC105020282

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047591.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    12469563..12480638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013140146.4 → XP_012995600.3  mucin-17-like isoform X2

    UniProtKB/TrEMBL
    A0A3P8ZF32
    Conserved Domains (4) summary
    PRK10856
    Location:958 → 1061
    PRK10856; cytoskeleton protein RodZ
    cd01439
    Location:407 → 521
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam05109
    Location:553 → 980
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam02825
    Location:227 → 298
    WWE; WWE domain

  2. XM_034290044.1 → XP_034145935.1  uncharacterized protein LOC105020282 isoform X1

    UniProtKB/TrEMBL
    A0A3P8ZF32
    Related
    ENSELUP00000026902.3, ENSELUT00000017323.3
    Conserved Domains (4) summary
    PRK10856
    Location:1068 → 1171
    PRK10856; cytoskeleton protein RodZ
    cd01439
    Location:517 → 631
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
    pfam05109
    Location:663 → 1090
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam02825
    Location:337 → 408
    WWE; WWE domain
Nucleotide Protein
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