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si:ch73-252i11.1 WWE and TCCD_inducible_PARP_like domain-containing protein [ Esox lucius (northern pike) ]

Gene ID: 105020238, updated on 18-Sep-2024

Summary

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Gene symbol
si:ch73-252i11.1
Gene description
WWE and TCCD_inducible_PARP_like domain-containing protein
See related
Ensembl:ENSELUG00000004066
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
ZCC2
Orthologs
zebrafish all
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Genomic context

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See si:ch73-252i11.1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
15
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 23 NC_047591.1 (11846493..11860300)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG23 NC_025990.4 (13545405..13559207, complement)

Chromosome 23 - NC_047591.1Genomic Context describing neighboring genes Neighboring gene ETS variant transcription factor 6 Neighboring gene poly [ADP-ribose] polymerase 12-like Neighboring gene ubiquitin specific peptidase 18 Neighboring gene G1/S-specific cyclin-D2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein mono-ADP-ribosyltransferase PARP12
Names
Zinc finger CCCH type antiviral protein 1
poly [ADP-ribose] polymerase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047591.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    11846493..11860300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010887097.4 → XP_010885399.2  protein mono-ADP-ribosyltransferase PARP12 isoform X1

    UniProtKB/TrEMBL
    A0A3P8ZH12
    Related
    ENSELUP00000027733.2, ENSELUT00000015193.3
    Conserved Domains (3) summary
    smart00678
    Location:366 → 442
    WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
    smart00356
    Location:269 → 293
    ZnF_C3H1; zinc finger
    cd01439
    Location:546 → 661
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...

  2. XM_010887098.4 → XP_010885400.2  protein mono-ADP-ribosyltransferase PARP12 isoform X2

    UniProtKB/TrEMBL
    A0A3P8ZH12
    Conserved Domains (3) summary
    smart00678
    Location:365 → 441
    WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
    smart00356
    Location:269 → 293
    ZnF_C3H1; zinc finger
    cd01439
    Location:545 → 660
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...

  3. XM_010887099.3 → XP_010885401.2  protein mono-ADP-ribosyltransferase PARP12 isoform X3

    UniProtKB/TrEMBL
    A0A6Q2ZEB6
    Conserved Domains (3) summary
    smart00678
    Location:242 → 318
    WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
    smart00356
    Location:145 → 169
    ZnF_C3H1; zinc finger
    cd01439
    Location:422 → 537
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...

  4. XM_020043035.2 → XP_019898594.2  protein mono-ADP-ribosyltransferase PARP12 isoform X3

    UniProtKB/TrEMBL
    A0A6Q2ZEB6
    Conserved Domains (3) summary
    smart00678
    Location:242 → 318
    WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
    smart00356
    Location:145 → 169
    ZnF_C3H1; zinc finger
    cd01439
    Location:422 → 537
    TCCD_inducible_PARP_like; Poly(ADP-ribose) polymerases catalyse the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ...
Nucleotide Protein
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