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arl11 ADP-ribosylation factor-like 11 [ Esox lucius (northern pike) ]

Gene ID: 105019840, updated on 18-Jun-2024

Summary

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Gene symbol
arl11
Gene description
ADP-ribosylation factor-like 11
See related
Ensembl:ENSELUG00000035440
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Orthologs
human zebrafish all
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Genomic context

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See arl11 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
2
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 22 NC_047590.1 (12377199..12378798)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG22 NC_025989.4 (12509804..12511398)

Chromosome 22 - NC_047590.1Genomic Context describing neighboring genes Neighboring gene calcium binding protein 39-like Neighboring gene cytidine and dCMP deaminase domain containing 1 Neighboring gene regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 Neighboring gene sodium/potassium-transporting ATPase subunit alpha-1 Neighboring gene EBP like Neighboring gene karyopherin alpha 3 (importin alpha 4)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 11
Names
ADP ribosylation factor like GTPase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047590.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    12377199..12378798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010886322.3 → XP_010884624.2  ADP-ribosylation factor-like protein 11

    UniProtKB/TrEMBL
    A0A3P8ZJ26
    Related
    ENSELUP00000094869.1, ENSELUT00000103673.1
    Conserved Domains (1) summary
    cl38936
    Location:16 → 173
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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