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eef1a1l3 eukaryotic translation elongation factor 1 alpha 1, like 3 [ Esox lucius (northern pike) ]

Gene ID: 105019383, updated on 18-Jun-2024

Summary

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Gene symbol
eef1a1l3
Gene description
eukaryotic translation elongation factor 1 alpha 1, like 3
See related
Ensembl:ENSELUG00000007495
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
Also known as
si:dkey-37o8.1
Orthologs
zebrafish all
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Genomic context

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See eef1a1l3 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 21 NC_047589.1 (8763950..8766668)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG21 NC_025988.4 (23748345..23751064, complement)

Chromosome 21 - NC_047589.1Genomic Context describing neighboring genes Neighboring gene MYC proto-oncogene, bHLH transcription factor a Neighboring gene family with sequence similarity 49 member Bb Neighboring gene ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b Neighboring gene nuclear transcription factor, X-box binding 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-alpha
Names
Elongation factor 1-alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047589.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    8763950..8766668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010885535.5 → XP_010883837.1  elongation factor 1-alpha

    UniProtKB/TrEMBL
    A0A3P8XQ08
    Related
    ENSELUP00000006631.1, ENSELUT00000008617.3
    Conserved Domains (4) summary
    PTZ00141
    Location:1 → 458
    PTZ00141; elongation factor 1- alpha; Provisional
    cd01883
    Location:9 → 239
    EF1_alpha; Elongation Factor 1-alpha (EF1-alpha) protein family
    cd03693
    Location:243 → 332
    EF1_alpha_II; Domain II of elongation factor 1-alpha
    cd03705
    Location:339 → 438
    EF1_alpha_III; Domain III of Elongation Factor 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases