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LOC105018543 septin-7 [ Esox lucius (northern pike) ]

Gene ID: 105018543, updated on 18-Jun-2024

Summary

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Gene symbol
LOC105018543
Gene description
septin-7
See related
Ensembl:ENSELUG00000011800
Gene type
protein coding
RefSeq status
MODEL
Organism
Esox lucius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox
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Genomic context

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See LOC105018543 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
15
Annotation release Status Assembly Chr Location
104 current fEsoLuc1.pri (GCF_011004845.1) 19 NC_047587.1 (28407978..28436906, complement)
103 previous assembly Eluc_v4 (GCF_004634155.1) Linkage Group LG19 NC_025986.4 (28640167..28669306, complement)

Chromosome 19 - NC_047587.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 3-like 1 Neighboring gene anillin, actin binding protein 2 Neighboring gene C-C motif chemokine ligand 22 Neighboring gene C-C motif chemokine 4-like Neighboring gene sphingomyelin phosphodiesterase 3 Neighboring gene uncharacterized si:dkeyp-50b9.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Esox lucius Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEsoLuc1.pri Primary Assembly

Genomic

  1. NC_047587.1 Reference fEsoLuc1.pri Primary Assembly

    Range
    28407978..28436906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034288249.1 → XP_034144140.1  septin-7 isoform X1

    UniProtKB/TrEMBL
    A0A3P8Y3Y8
    Conserved Domains (2) summary
    cd01850
    Location:81 → 355
    CDC_Septin; CDC/Septin GTPase family
    pfam00769
    Location:377 → 469
    ERM; Ezrin/radixin/moesin family

  2. XM_013139003.4 → XP_012994457.1  septin-7 isoform X5

    UniProtKB/TrEMBL
    A0A6Q2XE87
    Conserved Domains (2) summary
    cd01850
    Location:36 → 310
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:18 → 404
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  3. XM_020040419.2 → XP_019895978.1  septin-7 isoform X4

    UniProtKB/TrEMBL
    A0A3P8Y403, A0A6Q2XE87
    Related
    ENSELUP00000011387.1, ENSELUT00000000529.3
    Conserved Domains (2) summary
    cd01850
    Location:37 → 311
    CDC_Septin; CDC/Septin GTPase family
    cl25548
    Location:333 → 430
    DUF4670; Domain of unknown function (DUF4670)

  4. XM_010884066.4 → XP_010882368.1  septin-7 isoform X7

    UniProtKB/TrEMBL
    A0A6Q2XE87
    Related
    ENSELUP00000058678.2, ENSELUT00000081979.2
    Conserved Domains (2) summary
    cd01850
    Location:36 → 306
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:18 → 400
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  5. XM_010884065.4 → XP_010882367.1  septin-7 isoform X6

    UniProtKB/TrEMBL
    A0A3P8Y5V0, A0A6Q2XE87
    Related
    ENSELUP00000011395.1, ENSELUT00000000545.3
    Conserved Domains (2) summary
    cd01850
    Location:37 → 307
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:19 → 401
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  6. XM_034288250.1 → XP_034144141.1  septin-7 isoform X2

    UniProtKB/TrEMBL
    A0A3P8Y3Y8
    Conserved Domains (2) summary
    cd01850
    Location:80 → 354
    CDC_Septin; CDC/Septin GTPase family
    pfam00769
    Location:376 → 468
    ERM; Ezrin/radixin/moesin family

  7. XM_034288251.1 → XP_034144142.1  septin-7 isoform X3

    UniProtKB/TrEMBL
    A0A3P8Y3Y8
    Related
    ENSELUP00000011378.2, ENSELUT00000000582.3
    Conserved Domains (2) summary
    cd01850
    Location:81 → 351
    CDC_Septin; CDC/Septin GTPase family
    pfam00769
    Location:373 → 465
    ERM; Ezrin/radixin/moesin family
Nucleotide Protein
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